Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
USP46P62068 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
USP46P62068 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.34■□□□□ 0.21
USP46P62068 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
USP46P62068 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
USP46P62068 ACTG1P3-201ENST00000431775 1114 ntBASIC16.34■□□□□ 0.21
USP46P62068 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.34■□□□□ 0.21
USP46P62068 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.34■□□□□ 0.21
USP46P62068 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.34■□□□□ 0.21
USP46P62068 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.34■□□□□ 0.21
USP46P62068 AC015936.2-201ENST00000593177 259 ntBASIC16.34■□□□□ 0.21
USP46P62068 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 AC107373.2-201ENST00000607735 490 ntBASIC16.34■□□□□ 0.21
USP46P62068 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.34■□□□□ 0.21
USP46P62068 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.34■□□□□ 0.21
USP46P62068 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP46P62068 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
USP46P62068 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.21
USP46P62068 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP46P62068 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
USP46P62068 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP46P62068 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP46P62068 AC127383.1-201ENST00000444697 1800 ntBASIC16.33■□□□□ 0.21
USP46P62068 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.33■□□□□ 0.21
USP46P62068 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
USP46P62068 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP46P62068 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.33■□□□□ 0.21
USP46P62068 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP46P62068 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.33■□□□□ 0.21
USP46P62068 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
USP46P62068 GAPDHP40-201ENST00000505218 1006 ntBASIC16.33■□□□□ 0.2
USP46P62068 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
USP46P62068 SLC25A47P1-201ENST00000531577 414 ntBASIC16.33■□□□□ 0.2
USP46P62068 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 ENPP7P5-201ENST00000541031 1031 ntBASIC16.33■□□□□ 0.2
USP46P62068 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.33■□□□□ 0.2
USP46P62068 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.33■□□□□ 0.2
USP46P62068 BTNL10-201ENST00000595971 695 ntBASIC16.33■□□□□ 0.2
USP46P62068 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.33■□□□□ 0.2
USP46P62068 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
USP46P62068 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
USP46P62068 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP46P62068 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP46P62068 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
USP46P62068 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP46P62068 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP46P62068 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms