Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
UBE2NP61088 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2NP61088 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2NP61088 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
UBE2NP61088 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 CICP13-201ENST00000422015 2789 ntBASIC13.7□□□□□ -0.22
UBE2NP61088 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2NP61088 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2NP61088 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2NP61088 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 RPL13AP25-201ENST00000484130 612 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.69□□□□□ -0.22
UBE2NP61088 AC123567.1-201ENST00000548294 1261 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.69□□□□□ -0.22
UBE2NP61088 AC004790.1-201ENST00000612686 536 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
UBE2NP61088 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 AL121723.1-201ENST00000445194 1519 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
UBE2NP61088 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 HYMAI-201ENST00000635591 3347 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2NP61088 AC092127.1-201ENST00000567093 3455 ntBASIC13.69□□□□□ -0.22
UBE2NP61088 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2NP61088 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 CLK3P2-201ENST00000427566 1453 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2NP61088 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms