Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC092580.3-201ENST00000430932 139 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.92□□□□□ -0.18
CLRN1P58418 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 GPALPP1-207ENST00000611650 899 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 AC006538.3-201ENST00000612495 578 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLRN1P58418 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 RPL5P21-201ENST00000404620 815 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 AC074338.1-201ENST00000416825 156 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 AC015922.1-201ENST00000421102 1152 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 AC241585.1-201ENST00000433527 519 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.91□□□□□ -0.18
CLRN1P58418 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.91□□□□□ -0.18
CLRN1P58418 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.91□□□□□ -0.18
CLRN1P58418 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 DUX4L27-201ENST00000554796 1261 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CLRN1P58418 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.91□□□□□ -0.18
CLRN1P58418 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CLRN1P58418 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 AC084364.1-201ENST00000551967 1556 ntBASIC13.91□□□□□ -0.18
CLRN1P58418 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLRN1P58418 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLRN1P58418 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLRN1P58418 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLRN1P58418 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLRN1P58418 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLRN1P58418 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.9□□□□□ -0.18
CLRN1P58418 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLRN1P58418 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms