Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH4P55283 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 AC093433.1-201ENST00000458048 571 ntBASIC15.81■□□□□ 0.12
CDH4P55283 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH4P55283 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.81■□□□□ 0.12
CDH4P55283 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDH4P55283 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH4P55283 AC007787.1-201ENST00000588095 1583 ntBASIC15.81■□□□□ 0.12
CDH4P55283 AC008735.3-201ENST00000596646 500 ntBASIC15.81■□□□□ 0.12
CDH4P55283 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH4P55283 AP005019.2-201ENST00000615104 511 ntBASIC15.81■□□□□ 0.12
CDH4P55283 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 AC112693.3-201ENST00000624819 1983 ntBASIC15.81■□□□□ 0.12
CDH4P55283 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDH4P55283 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH4P55283 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH4P55283 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH4P55283 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH4P55283 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH4P55283 AC132872.4-202ENST00000622924 2756 ntBASIC15.8■□□□□ 0.12
CDH4P55283 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDH4P55283 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 TMEM14DP-201ENST00000422205 345 ntBASIC15.8■□□□□ 0.12
CDH4P55283 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH4P55283 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH4P55283 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH4P55283 AC022137.2-201ENST00000503482 481 ntBASIC15.8■□□□□ 0.12
CDH4P55283 AC068587.3-201ENST00000526613 355 ntBASIC15.8■□□□□ 0.12
CDH4P55283 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH4P55283 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH4P55283 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH4P55283 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CDH4P55283 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH4P55283 C18orf15-201ENST00000623680 2534 ntBASIC15.79■□□□□ 0.12
CDH4P55283 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.79■□□□□ 0.12
CDH4P55283 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CDH4P55283 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH4P55283 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDH4P55283 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH4P55283 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.79■□□□□ 0.12
CDH4P55283 BAATP1-201ENST00000412284 1225 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms