Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GNAQP1-201ENST00000444815 1067 ntBASIC16.05■□□□□ 0.16
NEK3P51956 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.05■□□□□ 0.16
NEK3P51956 AC093004.1-201ENST00000508850 424 ntBASIC16.05■□□□□ 0.16
NEK3P51956 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.05■□□□□ 0.16
NEK3P51956 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.05■□□□□ 0.16
NEK3P51956 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
NEK3P51956 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.05■□□□□ 0.16
NEK3P51956 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 SRD5A3P1-201ENST00000603021 949 ntBASIC16.05■□□□□ 0.16
NEK3P51956 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NEK3P51956 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.05■□□□□ 0.16
NEK3P51956 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEK3P51956 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.05■□□□□ 0.16
NEK3P51956 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NEK3P51956 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NEK3P51956 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.04■□□□□ 0.16
NEK3P51956 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 AZGP1P1-201ENST00000411909 902 ntBASIC16.04■□□□□ 0.16
NEK3P51956 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.04■□□□□ 0.16
NEK3P51956 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.04■□□□□ 0.16
NEK3P51956 AL353779.1-201ENST00000434793 351 ntBASIC16.04■□□□□ 0.16
NEK3P51956 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.04■□□□□ 0.16
NEK3P51956 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
NEK3P51956 AL358472.5-202ENST00000641448 1267 ntBASIC16.04■□□□□ 0.16
NEK3P51956 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NEK3P51956 AC009090.5-201ENST00000624886 2285 ntBASIC16.04■□□□□ 0.16
NEK3P51956 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NEK3P51956 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
NEK3P51956 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEK3P51956 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.04■□□□□ 0.16
NEK3P51956 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEK3P51956 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.04■□□□□ 0.16
NEK3P51956 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.03■□□□□ 0.16
NEK3P51956 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 LINC01101-201ENST00000622953 1884 ntBASIC16.03■□□□□ 0.16
NEK3P51956 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NEK3P51956 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 AL391825.1-201ENST00000457671 1364 ntBASIC16.03■□□□□ 0.16
NEK3P51956 AC106881.1-201ENST00000605849 3329 ntBASIC16.03■□□□□ 0.16
NEK3P51956 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
NEK3P51956 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NEK3P51956 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 AC005225.4-201ENST00000557330 545 ntBASIC16.03■□□□□ 0.16
NEK3P51956 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.03■□□□□ 0.16
NEK3P51956 AC012645.4-201ENST00000610691 1061 ntBASIC16.03■□□□□ 0.16
NEK3P51956 AC004790.1-201ENST00000612686 536 ntBASIC16.03■□□□□ 0.16
NEK3P51956 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.03■□□□□ 0.16
NEK3P51956 AC025048.6-201ENST00000634326 1161 ntBASIC16.03■□□□□ 0.16
NEK3P51956 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms