Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.47■□□□□ 0.39
USP11P51784 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 AL513477.1-201ENST00000602865 2407 ntBASIC17.47■□□□□ 0.39
USP11P51784 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
USP11P51784 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.47■□□□□ 0.39
USP11P51784 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 KRT17P7-201ENST00000451704 1104 ntBASIC17.47■□□□□ 0.39
USP11P51784 AC093433.1-201ENST00000458048 571 ntBASIC17.47■□□□□ 0.39
USP11P51784 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.47■□□□□ 0.39
USP11P51784 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.47■□□□□ 0.39
USP11P51784 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 AP001582.1-201ENST00000525856 295 ntBASIC17.47■□□□□ 0.39
USP11P51784 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.47■□□□□ 0.39
USP11P51784 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 AC148477.4-201ENST00000613430 1793 ntBASIC17.47■□□□□ 0.39
USP11P51784 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.47■□□□□ 0.39
USP11P51784 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
USP11P51784 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
USP11P51784 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.46■□□□□ 0.39
USP11P51784 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP11P51784 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
USP11P51784 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
USP11P51784 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
USP11P51784 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.46■□□□□ 0.39
USP11P51784 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.46■□□□□ 0.39
USP11P51784 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 AC114812.1-204ENST00000449669 728 ntBASIC17.46■□□□□ 0.39
USP11P51784 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
USP11P51784 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
USP11P51784 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.46■□□□□ 0.39
USP11P51784 AC015936.2-201ENST00000593177 259 ntBASIC17.46■□□□□ 0.39
USP11P51784 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.46■□□□□ 0.39
USP11P51784 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP11P51784 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.46■□□□□ 0.38
USP11P51784 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP11P51784 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP11P51784 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.45■□□□□ 0.38
USP11P51784 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP11P51784 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
USP11P51784 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
USP11P51784 AC005034.1-201ENST00000426657 489 ntBASIC17.45■□□□□ 0.38
USP11P51784 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.45■□□□□ 0.38
USP11P51784 GIMAP3P-201ENST00000495150 836 ntBASIC17.45■□□□□ 0.38
USP11P51784 AC022137.2-201ENST00000503482 481 ntBASIC17.45■□□□□ 0.38
USP11P51784 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms