Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.73□□□□□ -0.21
CCR9P51686 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCR9P51686 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCR9P51686 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.73□□□□□ -0.21
CCR9P51686 FAM58CP-201ENST00000435741 640 ntBASIC13.73□□□□□ -0.21
CCR9P51686 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 KRT18P3-201ENST00000451602 1288 ntBASIC13.73□□□□□ -0.21
CCR9P51686 AC079140.1-201ENST00000508039 487 ntBASIC13.73□□□□□ -0.21
CCR9P51686 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.73□□□□□ -0.21
CCR9P51686 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CCR9P51686 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
CCR9P51686 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 AP3S2-216ENST00000617003 1561 ntBASIC13.73□□□□□ -0.21
CCR9P51686 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CCR9P51686 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCR9P51686 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CCR9P51686 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCR9P51686 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CCR9P51686 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCR9P51686 AC084364.1-201ENST00000551967 1556 ntBASIC13.72□□□□□ -0.21
CCR9P51686 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCR9P51686 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CCR9P51686 AZGP1P1-201ENST00000411909 902 ntBASIC13.72□□□□□ -0.21
CCR9P51686 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.72□□□□□ -0.21
CCR9P51686 ACTG1P14-201ENST00000446382 1122 ntBASIC13.72□□□□□ -0.21
CCR9P51686 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.72□□□□□ -0.21
CCR9P51686 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CCR9P51686 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.72□□□□□ -0.21
CCR9P51686 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCR9P51686 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCR9P51686 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CCR9P51686 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.71□□□□□ -0.21
CCR9P51686 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCR9P51686 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCR9P51686 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCR9P51686 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCR9P51686 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.71□□□□□ -0.21
CCR9P51686 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCR9P51686 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms