Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 LINC02228-204ENST00000642115 2962 ntBASIC16.91■□□□□ 0.3
CASP4P49662 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP4P49662 MROH4P-201ENST00000431302 1578 ntBASIC16.91■□□□□ 0.3
CASP4P49662 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.91■□□□□ 0.3
CASP4P49662 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP4P49662 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.91■□□□□ 0.3
CASP4P49662 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.91■□□□□ 0.3
CASP4P49662 RARRES2P5-201ENST00000564013 466 ntBASIC16.91■□□□□ 0.3
CASP4P49662 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 MIR4745-201ENST00000577608 62 ntBASIC16.91■□□□□ 0.3
CASP4P49662 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CASP4P49662 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CASP4P49662 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CASP4P49662 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.91■□□□□ 0.3
CASP4P49662 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASP4P49662 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 AP000845.1-201ENST00000581677 2131 ntBASIC16.9■□□□□ 0.3
CASP4P49662 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.9■□□□□ 0.3
CASP4P49662 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 AC009118.2-201ENST00000613275 655 ntBASIC16.9■□□□□ 0.3
CASP4P49662 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 AC008761.3-201ENST00000624803 892 ntBASIC16.9■□□□□ 0.3
CASP4P49662 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
CASP4P49662 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASP4P49662 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASP4P49662 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.89■□□□□ 0.3
CASP4P49662 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.89■□□□□ 0.3
CASP4P49662 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CASP4P49662 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.89■□□□□ 0.29
CASP4P49662 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CASP4P49662 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.89■□□□□ 0.29
CASP4P49662 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CASP4P49662 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 GHSR-202ENST00000427970 912 ntBASIC16.89■□□□□ 0.29
CASP4P49662 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.89■□□□□ 0.29
CASP4P49662 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CASP4P49662 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.89■□□□□ 0.29
CASP4P49662 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.89■□□□□ 0.29
CASP4P49662 MIR8072-201ENST00000614241 80 ntBASIC16.89■□□□□ 0.29
CASP4P49662 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CASP4P49662 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.89■□□□□ 0.29
CASP4P49662 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASP4P49662 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CASP4P49662 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms