Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
PCP4P48539 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 AC104024.2-201ENST00000562897 3077 ntBASIC10.27□□□□□ -0.76
PCP4P48539 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 LRRTM4-204ENST00000409884 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.27□□□□□ -0.76
PCP4P48539 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
PCP4P48539 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.76
PCP4P48539 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
PCP4P48539 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC10.27□□□□□ -0.76
PCP4P48539 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 AC008620.2-201ENST00000510294 1569 ntBASIC10.27□□□□□ -0.76
PCP4P48539 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PCP4P48539 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 MATN1-201ENST00000373765 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.27□□□□□ -0.77
PCP4P48539 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 AC079140.1-201ENST00000508039 487 ntBASIC10.27□□□□□ -0.77
PCP4P48539 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
PCP4P48539 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC10.27□□□□□ -0.77
PCP4P48539 GOLGA8CP-201ENST00000446144 5237 ntBASIC10.27□□□□□ -0.77
PCP4P48539 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PCP4P48539 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PCP4P48539 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 FGD5P1-201ENST00000611158 3374 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms