Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SSR1P43307 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SSR1P43307 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.62■□□□□ 0.25
SSR1P43307 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 AP000344.2-201ENST00000512987 629 ntBASIC16.62■□□□□ 0.25
SSR1P43307 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.62■□□□□ 0.25
SSR1P43307 AL109954.1-202ENST00000564051 2148 ntBASIC16.62■□□□□ 0.25
SSR1P43307 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.62■□□□□ 0.25
SSR1P43307 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.62■□□□□ 0.25
SSR1P43307 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.62■□□□□ 0.25
SSR1P43307 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SSR1P43307 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSR1P43307 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSR1P43307 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.62■□□□□ 0.25
SSR1P43307 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SSR1P43307 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.62■□□□□ 0.25
SSR1P43307 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.61■□□□□ 0.25
SSR1P43307 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 AZGP1P1-201ENST00000411909 902 ntBASIC16.61■□□□□ 0.25
SSR1P43307 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SSR1P43307 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.61■□□□□ 0.25
SSR1P43307 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.61■□□□□ 0.25
SSR1P43307 MIR6080-201ENST00000617359 66 ntBASIC16.61■□□□□ 0.25
SSR1P43307 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.61■□□□□ 0.25
SSR1P43307 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSR1P43307 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SSR1P43307 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SSR1P43307 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.6■□□□□ 0.25
SSR1P43307 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms