Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MTHFRP42898 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
MTHFRP42898 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTHFRP42898 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
MTHFRP42898 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.22■□□□□ 0.19
MTHFRP42898 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTHFRP42898 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTHFRP42898 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.22■□□□□ 0.19
MTHFRP42898 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MTHFRP42898 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MTHFRP42898 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MTHFRP42898 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MTHFRP42898 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 AL354989.2-201ENST00000435838 1540 ntBASIC16.21■□□□□ 0.19
MTHFRP42898 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
MTHFRP42898 TPM3P8-201ENST00000330554 643 ntBASIC16.21■□□□□ 0.19
MTHFRP42898 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 MIR663B-201ENST00000408361 115 ntBASIC16.21■□□□□ 0.19
MTHFRP42898 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.21■□□□□ 0.19
MTHFRP42898 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.21■□□□□ 0.19
MTHFRP42898 HIST2H2BC-201ENST00000498492 580 ntBASIC16.21■□□□□ 0.19
MTHFRP42898 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.21■□□□□ 0.19
MTHFRP42898 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
MTHFRP42898 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
MTHFRP42898 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.21■□□□□ 0.19
MTHFRP42898 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MTHFRP42898 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MTHFRP42898 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MTHFRP42898 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.21■□□□□ 0.18
MTHFRP42898 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MTHFRP42898 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ACTBP8-201ENST00000403258 1108 ntBASIC16.2■□□□□ 0.18
MTHFRP42898 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.2■□□□□ 0.18
MTHFRP42898 AC105129.2-201ENST00000559536 390 ntBASIC16.2■□□□□ 0.18
MTHFRP42898 RN7SL48P-201ENST00000579283 293 ntBASIC16.2■□□□□ 0.18
MTHFRP42898 NDUFV2P1-201ENST00000596415 907 ntBASIC16.2■□□□□ 0.18
MTHFRP42898 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.2■□□□□ 0.18
MTHFRP42898 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.2■□□□□ 0.18
MTHFRP42898 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MTHFRP42898 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MTHFRP42898 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MTHFRP42898 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 AL513523.2-202ENST00000427283 2040 ntBASIC16.19■□□□□ 0.18
MTHFRP42898 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MTHFRP42898 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MTHFRP42898 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MTHFRP42898 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms