Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 CLK3P2-201ENST00000427566 1453 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBEC1P41238 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBEC1P41238 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 DFFBP1-201ENST00000433250 979 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 GNAQP1-201ENST00000444815 1067 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBEC1P41238 FAM86LP-201ENST00000478302 853 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 RPL13AP25-201ENST00000484130 612 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 SERBP1P5-201ENST00000510079 1181 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 AC055876.2-201ENST00000531834 546 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.04□□□□□ -0.16
APOBEC1P41238 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
APOBEC1P41238 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.04□□□□□ -0.16
APOBEC1P41238 AC004233.3-201ENST00000607794 1269 ntBASIC14.04□□□□□ -0.16
APOBEC1P41238 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBEC1P41238 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
APOBEC1P41238 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
APOBEC1P41238 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
APOBEC1P41238 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBEC1P41238 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBEC1P41238 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 AC087499.6-201ENST00000411576 835 ntBASIC14.03□□□□□ -0.16
APOBEC1P41238 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 GHSR-202ENST00000427970 912 ntBASIC14.03□□□□□ -0.16
APOBEC1P41238 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.03□□□□□ -0.16
APOBEC1P41238 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.03□□□□□ -0.16
APOBEC1P41238 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.03□□□□□ -0.16
APOBEC1P41238 AC104596.2-201ENST00000512793 793 ntBASIC14.03□□□□□ -0.16
APOBEC1P41238 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.03□□□□□ -0.16
APOBEC1P41238 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
APOBEC1P41238 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 LINC02560-201ENST00000596379 459 ntBASIC14.03□□□□□ -0.16
APOBEC1P41238 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBEC1P41238 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOBEC1P41238 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOBEC1P41238 SLC7A15P-201ENST00000424028 1363 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms