Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 CICP13-201ENST00000422015 2789 ntBASIC15.68■□□□□ 0.1
XPAP23025 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
XPAP23025 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
XPAP23025 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.68■□□□□ 0.1
XPAP23025 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.68■□□□□ 0.1
XPAP23025 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 VDAC1P7-201ENST00000462417 847 ntBASIC15.68■□□□□ 0.1
XPAP23025 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.68■□□□□ 0.1
XPAP23025 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
XPAP23025 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 AC000095.1-201ENST00000603208 874 ntBASIC15.68■□□□□ 0.1
XPAP23025 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.68■□□□□ 0.1
XPAP23025 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 AC092127.1-201ENST00000567093 3455 ntBASIC15.68■□□□□ 0.1
XPAP23025 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 INTS4P2-202ENST00000614726 2019 ntBASIC15.68■□□□□ 0.1
XPAP23025 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XPAP23025 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.68■□□□□ 0.1
XPAP23025 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 KRT8P22-201ENST00000562317 1415 ntBASIC15.68■□□□□ 0.1
XPAP23025 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
XPAP23025 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 AL512384.1-201ENST00000406683 331 ntBASIC15.67■□□□□ 0.1
XPAP23025 SOCS2P1-201ENST00000417727 557 ntBASIC15.67■□□□□ 0.1
XPAP23025 AL162726.2-201ENST00000438986 1017 ntBASIC15.67■□□□□ 0.1
XPAP23025 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.67■□□□□ 0.1
XPAP23025 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 AL365203.3-201ENST00000609742 2057 ntBASIC15.67■□□□□ 0.1
XPAP23025 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.67■□□□□ 0.1
XPAP23025 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
XPAP23025 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.67■□□□□ 0.1
XPAP23025 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms