Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2B1P20020 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC241585.1-201ENST00000433527 519 ntBASIC17.96■□□□□ 0.47
ATP2B1P20020 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP2B1P20020 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP2B1P20020 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ATP2B1P20020 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATP2B1P20020 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2B1P20020 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ATP2B1P20020 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
ATP2B1P20020 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2B1P20020 AC087499.5-201ENST00000452760 1342 ntBASIC17.96■□□□□ 0.46
ATP2B1P20020 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2B1P20020 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2B1P20020 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2B1P20020 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ATP2B1P20020 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2B1P20020 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATP2B1P20020 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2B1P20020 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.95■□□□□ 0.46
ATP2B1P20020 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.95■□□□□ 0.46
ATP2B1P20020 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATP2B1P20020 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATP2B1P20020 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATP2B1P20020 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ATP2B1P20020 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2B1P20020 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATP2B1P20020 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP2B1P20020 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2B1P20020 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP2B1P20020 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP2B1P20020 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP2B1P20020 AC093214.1-201ENST00000511688 1107 ntBASIC17.94■□□□□ 0.46
ATP2B1P20020 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP2B1P20020 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP2B1P20020 AL109954.1-202ENST00000564051 2148 ntBASIC17.94■□□□□ 0.46
ATP2B1P20020 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2B1P20020 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
ATP2B1P20020 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2B1P20020 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms