Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL3L1P16619 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCL3L1P16619 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL3L1P16619 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL3L1P16619 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL3L1P16619 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CCL3L1P16619 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 MEP1AP4-201ENST00000423244 1087 ntBASIC12.82□□□□□ -0.36
CCL3L1P16619 DFFBP1-201ENST00000433250 979 ntBASIC12.82□□□□□ -0.36
CCL3L1P16619 RN7SL399P-201ENST00000471648 279 ntBASIC12.82□□□□□ -0.36
CCL3L1P16619 FAM86LP-201ENST00000478302 853 ntBASIC12.82□□□□□ -0.36
CCL3L1P16619 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL3L1P16619 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.82□□□□□ -0.36
CCL3L1P16619 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
CCL3L1P16619 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 AC138035.3-201ENST00000622706 2791 ntBASIC12.82□□□□□ -0.36
CCL3L1P16619 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL3L1P16619 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL3L1P16619 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CCL3L1P16619 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL3L1P16619 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL3L1P16619 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL3L1P16619 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL3L1P16619 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL3L1P16619 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL3L1P16619 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms