Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFRAP16234 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFRAP16234 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 CICP11-201ENST00000434745 2827 ntBASIC16.31■□□□□ 0.2
PDGFRAP16234 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFRAP16234 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDGFRAP16234 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDGFRAP16234 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 AC023024.2-201ENST00000623561 1993 ntBASIC16.3■□□□□ 0.2
PDGFRAP16234 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 SPDYE19P-201ENST00000338590 713 ntBASIC16.3■□□□□ 0.2
PDGFRAP16234 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PDGFRAP16234 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 COX20P2-201ENST00000452636 358 ntBASIC16.3■□□□□ 0.2
PDGFRAP16234 DOC2GP-202ENST00000514950 1163 ntBASIC16.3■□□□□ 0.2
PDGFRAP16234 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDGFRAP16234 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
PDGFRAP16234 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDGFRAP16234 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFRAP16234 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PDGFRAP16234 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFRAP16234 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 PIN1P1-201ENST00000412108 996 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFRAP16234 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 AC190387.1-201ENST00000551683 408 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
PDGFRAP16234 AL132655.2-201ENST00000596276 594 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFRAP16234 AL158212.4-201ENST00000624062 1286 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 AC091951.1-201ENST00000512854 2465 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms