Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXC6P09630 HINT2P1-201ENST00000419438 481 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 RN7SL720P-201ENST00000488178 304 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC6P09630 AC022616.1-201ENST00000518688 554 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXC6P09630 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC6P09630 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC6P09630 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 AC106820.3-201ENST00000561653 397 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXC6P09630 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HOXC6P09630 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC6P09630 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 CROCCP1-201ENST00000426910 5675 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC6P09630 AC024909.3-201ENST00000611513 2257 ntBASIC17.35■□□□□ 0.37
HOXC6P09630 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXC6P09630 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC6P09630 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HOXC6P09630 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HOXC6P09630 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXC6P09630 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC6P09630 HIST2H2BB-201ENST00000449108 381 ntBASIC17.34■□□□□ 0.37
HOXC6P09630 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC6P09630 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AL391280.1-201ENST00000506969 1062 ntBASIC17.34■□□□□ 0.37
HOXC6P09630 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC6P09630 AC005730.2-201ENST00000564549 1184 ntBASIC17.34■□□□□ 0.37
HOXC6P09630 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXC6P09630 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.34■□□□□ 0.37
HOXC6P09630 AC022748.3-201ENST00000621828 275 ntBASIC17.34■□□□□ 0.37
HOXC6P09630 AP001002.3-201ENST00000623482 206 ntBASIC17.34■□□□□ 0.37
HOXC6P09630 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC6P09630 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HOXC6P09630 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HOXC6P09630 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HOXC6P09630 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC6P09630 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXC6P09630 AL136309.1-201ENST00000403917 691 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXC6P09630 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 AC100850.1-201ENST00000506768 649 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.33■□□□□ 0.36
HOXC6P09630 AC245884.6-201ENST00000515672 1067 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 AC022217.1-201ENST00000521069 738 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXC6P09630 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXC6P09630 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 MIR4706-201ENST00000582134 82 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 AL645939.5-201ENST00000606834 243 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 AL023803.2-201ENST00000620080 638 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms