Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.94■□□□□ 0.78
COL5A2P05997 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
COL5A2P05997 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.93■□□□□ 0.78
COL5A2P05997 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.93■□□□□ 0.78
COL5A2P05997 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.93■□□□□ 0.78
COL5A2P05997 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
COL5A2P05997 AL137783.1-201ENST00000623494 1896 ntBASIC19.93■□□□□ 0.78
COL5A2P05997 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL5A2P05997 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL5A2P05997 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COL5A2P05997 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.92■□□□□ 0.78
COL5A2P05997 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.92■□□□□ 0.78
COL5A2P05997 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.92■□□□□ 0.78
COL5A2P05997 DNM1P30-201ENST00000563586 452 ntBASIC19.92■□□□□ 0.78
COL5A2P05997 AC026803.1-201ENST00000569130 274 ntBASIC19.92■□□□□ 0.78
COL5A2P05997 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.92■□□□□ 0.78
COL5A2P05997 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.92■□□□□ 0.78
COL5A2P05997 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A2P05997 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A2P05997 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 AC136759.1-202ENST00000530858 2194 ntBASIC19.92■□□□□ 0.78
COL5A2P05997 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A2P05997 AL627231.1-201ENST00000394467 1125 ntBASIC19.92■□□□□ 0.78
COL5A2P05997 RPS9P1-201ENST00000419943 583 ntBASIC19.92■□□□□ 0.78
COL5A2P05997 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A2P05997 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A2P05997 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
COL5A2P05997 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.92■□□□□ 0.78
COL5A2P05997 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
COL5A2P05997 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A2P05997 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A2P05997 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 AC020916.1-201ENST00000587762 1774 ntBASIC19.91■□□□□ 0.78
COL5A2P05997 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
COL5A2P05997 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.91■□□□□ 0.78
COL5A2P05997 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.91■□□□□ 0.78
COL5A2P05997 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A2P05997 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A2P05997 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL5A2P05997 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.91■□□□□ 0.78
COL5A2P05997 RPL8P2-201ENST00000430538 502 ntBASIC19.91■□□□□ 0.78
COL5A2P05997 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 POU5F1P2-201ENST00000521750 823 ntBASIC19.91■□□□□ 0.78
COL5A2P05997 AP002803.1-201ENST00000528836 498 ntBASIC19.91■□□□□ 0.78
COL5A2P05997 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A2P05997 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
COL5A2P05997 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.91■□□□□ 0.78
COL5A2P05997 MIR4649-201ENST00000582839 64 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms