Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 AC117489.1-201ENST00000625169 3217 ntBASIC14.57□□□□□ -0.08
OPN1SWP03999 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
OPN1SWP03999 INTS4P1-203ENST00000641008 3683 ntBASIC14.57□□□□□ -0.08
OPN1SWP03999 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
OPN1SWP03999 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.57□□□□□ -0.08
OPN1SWP03999 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
OPN1SWP03999 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
OPN1SWP03999 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
OPN1SWP03999 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
OPN1SWP03999 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.56□□□□□ -0.08
OPN1SWP03999 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC084364.1-201ENST00000551967 1556 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC005237.2-201ENST00000434368 219 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
OPN1SWP03999 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
OPN1SWP03999 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC105021.1-202ENST00000570572 669 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
OPN1SWP03999 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 MROH4P-201ENST00000431302 1578 ntBASIC14.56□□□□□ -0.08
OPN1SWP03999 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
OPN1SWP03999 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
OPN1SWP03999 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.55□□□□□ -0.08
OPN1SWP03999 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.55□□□□□ -0.08
OPN1SWP03999 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
OPN1SWP03999 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
OPN1SWP03999 KRT18P32-201ENST00000424695 1287 ntBASIC14.55□□□□□ -0.08
OPN1SWP03999 AC004832.2-201ENST00000426397 482 ntBASIC14.55□□□□□ -0.08
OPN1SWP03999 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms