Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.91■□□□□ 0.14
MT-ND3P03897 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.91■□□□□ 0.14
MT-ND3P03897 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AC098859.1-201ENST00000502915 1238 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.91■□□□□ 0.14
MT-ND3P03897 RNA5SP421-201ENST00000516864 134 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AL096865.1-201ENST00000606796 927 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 AP001059.3-201ENST00000619053 235 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 LINC00528-201ENST00000600723 2160 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AC232323.1-201ENST00000540724 2099 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 REXO1L5P-201ENST00000622260 2098 ntBASIC15.91■□□□□ 0.14
MT-ND3P03897 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND3P03897 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MT-ND3P03897 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND3P03897 AL390755.1-201ENST00000623716 2027 ntBASIC15.9■□□□□ 0.14
MT-ND3P03897 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.9■□□□□ 0.14
MT-ND3P03897 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.9■□□□□ 0.14
MT-ND3P03897 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 AC004987.2-201ENST00000395959 1148 ntBASIC15.9■□□□□ 0.14
MT-ND3P03897 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.9■□□□□ 0.14
MT-ND3P03897 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.9■□□□□ 0.14
MT-ND3P03897 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.9■□□□□ 0.14
MT-ND3P03897 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND3P03897 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
MT-ND3P03897 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND3P03897 LINC00552-201ENST00000625151 2579 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 MROH4P-201ENST00000431302 1578 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.89■□□□□ 0.13
MT-ND3P03897 SPDYE7P-202ENST00000420373 878 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND3P03897 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms