Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 AC003669.1-201ENST00000334569 611 ntBASIC12.46□□□□□ -0.41
APOC3P02656 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.46□□□□□ -0.41
APOC3P02656 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
APOC3P02656 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.46□□□□□ -0.41
APOC3P02656 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
APOC3P02656 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.46□□□□□ -0.41
APOC3P02656 MIR4492-201ENST00000581627 80 ntBASIC12.46□□□□□ -0.41
APOC3P02656 DGCR10-201ENST00000609839 495 ntBASIC12.46□□□□□ -0.41
APOC3P02656 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APOC3P02656 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC3P02656 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC3P02656 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.42
APOC3P02656 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APOC3P02656 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC3P02656 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.46□□□□□ -0.42
APOC3P02656 AC022400.8-201ENST00000623453 3599 ntBASIC12.46□□□□□ -0.42
APOC3P02656 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC3P02656 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.46□□□□□ -0.42
APOC3P02656 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC3P02656 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.46□□□□□ -0.42
APOC3P02656 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
APOC3P02656 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOC3P02656 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 ESRRAP1-201ENST00000400596 1257 ntBASIC12.45□□□□□ -0.42
APOC3P02656 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 AL353807.1-201ENST00000427475 662 ntBASIC12.45□□□□□ -0.42
APOC3P02656 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 AC097488.1-201ENST00000507834 756 ntBASIC12.45□□□□□ -0.42
APOC3P02656 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC3P02656 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 AL590326.2-201ENST00000625139 305 ntBASIC12.45□□□□□ -0.42
APOC3P02656 AL157888.1-201ENST00000631930 593 ntBASIC12.45□□□□□ -0.42
APOC3P02656 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.45□□□□□ -0.42
APOC3P02656 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC3P02656 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC3P02656 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC3P02656 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms