Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DQA2P01906 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 MIR4469-201ENST00000583919 79 ntBASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AC018529.1-201ENST00000613063 361 ntBASIC14.02□□□□□ -0.17
HLA-DQA2P01906 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AC084121.4-201ENST00000641598 221 ntBASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AF228730.8-201ENST00000642140 221 ntBASIC14.02□□□□□ -0.17
HLA-DQA2P01906 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.02□□□□□ -0.17
HLA-DQA2P01906 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AC007686.3-201ENST00000619017 3487 ntBASIC14.01□□□□□ -0.17
HLA-DQA2P01906 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 RBPMS2P1-201ENST00000437762 623 ntBASIC14.01□□□□□ -0.17
HLA-DQA2P01906 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AC105021.1-202ENST00000570572 669 ntBASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AC148477.4-201ENST00000613430 1793 ntBASIC14.01□□□□□ -0.17
HLA-DQA2P01906 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 AL513477.1-201ENST00000602865 2407 ntBASIC14.01□□□□□ -0.17
HLA-DQA2P01906 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms