Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CPNE6O95741 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE6O95741 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 CICP24-201ENST00000605464 2705 ntBASIC15.27■□□□□ 0.04
CPNE6O95741 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE6O95741 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE6O95741 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE6O95741 TMEM14DP-201ENST00000422205 345 ntBASIC15.27■□□□□ 0.04
CPNE6O95741 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE6O95741 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE6O95741 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE6O95741 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE6O95741 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.27■□□□□ 0.04
CPNE6O95741 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 AC026748.1-201ENST00000624349 3251 ntBASIC15.27■□□□□ 0.03
CPNE6O95741 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CPNE6O95741 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.27■□□□□ 0.03
CPNE6O95741 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CPNE6O95741 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE6O95741 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE6O95741 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CPNE6O95741 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE6O95741 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE6O95741 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE6O95741 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE6O95741 SSR4P1-203ENST00000599569 2260 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 AC074338.1-201ENST00000416825 156 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 HLA-V-201ENST00000429037 534 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 AL162726.2-201ENST00000438986 1017 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 RPS2P32-201ENST00000439199 892 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 AC022210.1-201ENST00000449856 793 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 PHKG1P2-201ENST00000457537 863 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.26■□□□□ 0.03
CPNE6O95741 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE6O95741 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.26■□□□□ 0.03
CPNE6O95741 AC008735.3-201ENST00000596646 500 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 AC133539.2-201ENST00000604757 467 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 AL512343.1-201ENST00000605837 169 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 AC007292.2-201ENST00000593524 1812 ntBASIC15.26■□□□□ 0.03
CPNE6O95741 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE6O95741 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CPNE6O95741 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms