Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH8O95206 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 AC012441.1-201ENST00000446669 685 ntBASIC15.5■□□□□ 0.07
PCDH8O95206 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH8O95206 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH8O95206 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH8O95206 MIR4259-201ENST00000584466 101 ntBASIC15.5■□□□□ 0.07
PCDH8O95206 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH8O95206 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
PCDH8O95206 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH8O95206 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH8O95206 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH8O95206 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PCDH8O95206 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH8O95206 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDH8O95206 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDH8O95206 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 AL138799.1-201ENST00000448213 1675 ntBASIC15.49■□□□□ 0.07
PCDH8O95206 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDH8O95206 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 AC025181.2-201ENST00000606994 802 ntBASIC15.49■□□□□ 0.07
PCDH8O95206 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 CICP13-201ENST00000422015 2789 ntBASIC15.49■□□□□ 0.07
PCDH8O95206 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDH8O95206 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
PCDH8O95206 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH8O95206 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH8O95206 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH8O95206 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH8O95206 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH8O95206 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH8O95206 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 AC127383.1-201ENST00000444697 1800 ntBASIC15.48■□□□□ 0.07
PCDH8O95206 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH8O95206 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH8O95206 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms