Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH16O75309 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH16O75309 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH16O75309 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH16O75309 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH16O75309 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDH16O75309 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH16O75309 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH16O75309 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH16O75309 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH16O75309 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH16O75309 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH16O75309 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH16O75309 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 AC027601.5-201ENST00000624065 2482 ntBASIC15.74■□□□□ 0.11
CDH16O75309 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CDH16O75309 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 MTHFR-210ENST00000641407 2387 ntBASIC15.74■□□□□ 0.11
CDH16O75309 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 AL022342.1-201ENST00000400363 863 ntBASIC15.74■□□□□ 0.11
CDH16O75309 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDH16O75309 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH16O75309 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH16O75309 AC112191.1-201ENST00000523689 701 ntBASIC15.74■□□□□ 0.11
CDH16O75309 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH16O75309 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH16O75309 AC099522.2-201ENST00000607001 744 ntBASIC15.74■□□□□ 0.11
CDH16O75309 Z83851.2-201ENST00000609564 659 ntBASIC15.74■□□□□ 0.11
CDH16O75309 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.74■□□□□ 0.11
CDH16O75309 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH16O75309 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH16O75309 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH16O75309 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 AKAP8P1-201ENST00000434743 1349 ntBASIC15.73■□□□□ 0.11
CDH16O75309 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH16O75309 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 AP000845.1-201ENST00000581677 2131 ntBASIC15.73■□□□□ 0.11
CDH16O75309 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH16O75309 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH16O75309 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH16O75309 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH16O75309 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.73■□□□□ 0.11
CDH16O75309 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH16O75309 AL591424.1-201ENST00000442569 1213 ntBASIC15.73■□□□□ 0.11
CDH16O75309 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 RPL13AP23-201ENST00000480739 586 ntBASIC15.73■□□□□ 0.11
CDH16O75309 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH16O75309 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH16O75309 AC106730.1-201ENST00000566722 1090 ntBASIC15.73■□□□□ 0.11
CDH16O75309 AP002472.1-201ENST00000577490 586 ntBASIC15.73■□□□□ 0.11
CDH16O75309 AC027307.2-201ENST00000591252 911 ntBASIC15.73■□□□□ 0.11
CDH16O75309 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH16O75309 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH16O75309 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH16O75309 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 LINC01230-201ENST00000625222 3017 ntBASIC15.73■□□□□ 0.11
CDH16O75309 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH16O75309 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH16O75309 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH16O75309 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms