Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 AL662844.4-201ENST00000606367 2838 ntBASIC18.03■□□□□ 0.48
CTNND1O60716 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTNND1O60716 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CTNND1O60716 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTNND1O60716 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CTNND1O60716 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CTNND1O60716 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CTNND1O60716 AL158070.2-201ENST00000623713 1621 ntBASIC18.02■□□□□ 0.48
CTNND1O60716 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTNND1O60716 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.02■□□□□ 0.48
CTNND1O60716 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.02■□□□□ 0.48
CTNND1O60716 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.02■□□□□ 0.48
CTNND1O60716 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CTNND1O60716 SCARNA20.5-201ENST00000516991 142 ntBASIC18.02■□□□□ 0.48
CTNND1O60716 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CTNND1O60716 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.02■□□□□ 0.48
CTNND1O60716 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.02■□□□□ 0.48
CTNND1O60716 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.02■□□□□ 0.48
CTNND1O60716 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CTNND1O60716 LINC02199-201ENST00000506655 2702 ntBASIC18.02■□□□□ 0.48
CTNND1O60716 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.02■□□□□ 0.47
CTNND1O60716 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.02■□□□□ 0.47
CTNND1O60716 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.02■□□□□ 0.47
CTNND1O60716 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
CTNND1O60716 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CTNND1O60716 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTNND1O60716 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 AL023775.1-201ENST00000454907 1746 ntBASIC18.01■□□□□ 0.47
CTNND1O60716 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 AC084364.1-201ENST00000551967 1556 ntBASIC18.01■□□□□ 0.47
CTNND1O60716 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.01■□□□□ 0.47
CTNND1O60716 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 SLC25A24P2-201ENST00000415059 510 ntBASIC18.01■□□□□ 0.47
CTNND1O60716 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.01■□□□□ 0.47
CTNND1O60716 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 POM121L10P-201ENST00000436994 1285 ntBASIC18.01■□□□□ 0.47
CTNND1O60716 BX284668.4-201ENST00000453917 508 ntBASIC18.01■□□□□ 0.47
CTNND1O60716 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.01■□□□□ 0.47
CTNND1O60716 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CTNND1O60716 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTNND1O60716 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTNND1O60716 AC112504.1-201ENST00000623415 1841 ntBASIC18■□□□□ 0.47
CTNND1O60716 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 AC018735.1-201ENST00000437208 1502 ntBASIC18■□□□□ 0.47
CTNND1O60716 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18■□□□□ 0.47
CTNND1O60716 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms