Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.85□□□□□ -0.03
LCMT2O60294 MYCLP2-201ENST00000449268 967 ntBASIC14.85□□□□□ -0.03
LCMT2O60294 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.85□□□□□ -0.03
LCMT2O60294 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 MIR3197-201ENST00000582241 73 ntBASIC14.85□□□□□ -0.03
LCMT2O60294 AC093726.1-201ENST00000608064 963 ntBASIC14.85□□□□□ -0.03
LCMT2O60294 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCMT2O60294 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LCMT2O60294 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LCMT2O60294 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 DRD5P1-201ENST00000456605 1438 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.84□□□□□ -0.03
LCMT2O60294 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 GAPDHP40-201ENST00000505218 1006 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 SPDYE22P-201ENST00000582158 798 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 BRI3BPP1-201ENST00000594224 787 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 AL049840.4-201ENST00000602422 811 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 AC008494.3-201ENST00000606615 944 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LCMT2O60294 AC007431.3-201ENST00000623221 587 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LCMT2O60294 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LCMT2O60294 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 AC006486.2-201ENST00000624246 2199 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.84□□□□□ -0.03
LCMT2O60294 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LCMT2O60294 AC023024.2-201ENST00000623561 1993 ntBASIC14.84□□□□□ -0.03
LCMT2O60294 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms