Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SMARCA5O60264 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCA5O60264 AC002472.2-201ENST00000442739 958 ntBASIC19.14■□□□□ 0.65
SMARCA5O60264 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCA5O60264 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCA5O60264 RARRES2P5-201ENST00000564013 466 ntBASIC19.14■□□□□ 0.65
SMARCA5O60264 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCA5O60264 CHCHD2P3-201ENST00000603038 451 ntBASIC19.14■□□□□ 0.65
SMARCA5O60264 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.14■□□□□ 0.65
SMARCA5O60264 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SMARCA5O60264 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCA5O60264 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMARCA5O60264 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCA5O60264 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCA5O60264 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCA5O60264 FAM86LP-201ENST00000478302 853 ntBASIC19.13■□□□□ 0.65
SMARCA5O60264 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.13■□□□□ 0.65
SMARCA5O60264 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCA5O60264 AL662799.1-202ENST00000614205 422 ntBASIC19.13■□□□□ 0.65
SMARCA5O60264 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCA5O60264 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCA5O60264 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCA5O60264 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 AP000845.1-201ENST00000581677 2131 ntBASIC19.12■□□□□ 0.65
SMARCA5O60264 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 REXO1L2P-201ENST00000425429 2069 ntBASIC19.12■□□□□ 0.65
SMARCA5O60264 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCA5O60264 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCA5O60264 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMARCA5O60264 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCA5O60264 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCA5O60264 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 RPL5P21-201ENST00000404620 815 ntBASIC19.12■□□□□ 0.65
SMARCA5O60264 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 RN7SL399P-201ENST00000471648 279 ntBASIC19.12■□□□□ 0.65
SMARCA5O60264 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCA5O60264 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCA5O60264 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 AC011467.4-201ENST00000594891 528 ntBASIC19.12■□□□□ 0.65
SMARCA5O60264 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCA5O60264 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms