Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.43■□□□□ 0.38
ACTN4O43707 AL390755.1-201ENST00000623716 2027 ntBASIC17.43■□□□□ 0.38
ACTN4O43707 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
ACTN4O43707 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 AC068418.2-201ENST00000577309 3703 ntBASIC17.43■□□□□ 0.38
ACTN4O43707 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ACTN4O43707 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.42■□□□□ 0.38
ACTN4O43707 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 AC104457.1-201ENST00000401024 814 ntBASIC17.42■□□□□ 0.38
ACTN4O43707 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.42■□□□□ 0.38
ACTN4O43707 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.42■□□□□ 0.38
ACTN4O43707 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.42■□□□□ 0.38
ACTN4O43707 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.42■□□□□ 0.38
ACTN4O43707 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ACTN4O43707 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.42■□□□□ 0.38
ACTN4O43707 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN4O43707 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
ACTN4O43707 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN4O43707 MIR1233-2-201ENST00000408138 82 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 MIR1233-1-201ENST00000408722 82 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN4O43707 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN4O43707 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ACTN4O43707 AC069120.2-201ENST00000524091 540 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 AC044860.1-202ENST00000559481 777 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 AC140878.1-201ENST00000565277 250 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
ACTN4O43707 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 AL691403.2-201ENST00000618460 490 ntBASIC17.41■□□□□ 0.38
ACTN4O43707 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN4O43707 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN4O43707 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms