Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.1■□□□□ 0.17
MSI1O43347 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 AC005252.2-201ENST00000624630 1141 ntBASIC16.1■□□□□ 0.17
MSI1O43347 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 CICP11-201ENST00000434745 2827 ntBASIC16.1■□□□□ 0.17
MSI1O43347 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.1■□□□□ 0.17
MSI1O43347 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
MSI1O43347 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
MSI1O43347 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MSI1O43347 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 AP001582.1-201ENST00000525856 295 ntBASIC16.09■□□□□ 0.17
MSI1O43347 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 CLUHP6-201ENST00000580789 941 ntBASIC16.09■□□□□ 0.17
MSI1O43347 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.09■□□□□ 0.17
MSI1O43347 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.09■□□□□ 0.17
MSI1O43347 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSI1O43347 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MSI1O43347 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.08■□□□□ 0.17
MSI1O43347 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MSI1O43347 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
MSI1O43347 MSTO2P-201ENST00000314835 1709 ntBASIC16.08■□□□□ 0.17
MSI1O43347 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MSI1O43347 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MSI1O43347 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.08■□□□□ 0.16
MSI1O43347 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MSI1O43347 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.08■□□□□ 0.16
MSI1O43347 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MSI1O43347 AC007389.4-201ENST00000454674 793 ntBASIC16.08■□□□□ 0.16
MSI1O43347 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSI1O43347 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.08■□□□□ 0.16
MSI1O43347 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.08■□□□□ 0.16
MSI1O43347 MIR5189-201ENST00000577370 114 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms