Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ABCC4O15439 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 RPL7P3-201ENST00000441388 714 ntBASIC19.6■□□□□ 0.73
ABCC4O15439 AL355994.2-201ENST00000447882 704 ntBASIC19.6■□□□□ 0.73
ABCC4O15439 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCC4O15439 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 MIR6869-201ENST00000619434 62 ntBASIC19.6■□□□□ 0.73
ABCC4O15439 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 REXO1L4P-201ENST00000605109 1937 ntBASIC19.6■□□□□ 0.73
ABCC4O15439 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCC4O15439 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCC4O15439 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ABCC4O15439 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ABCC4O15439 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ABCC4O15439 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 TUBB1P2-201ENST00000422712 1306 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 TUBB1P1-201ENST00000503144 1300 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCC4O15439 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCC4O15439 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ABCC4O15439 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCC4O15439 AC092933.1-201ENST00000393644 945 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 C1QBPP1-201ENST00000400117 770 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 FO681548.1-201ENST00000455617 1132 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCC4O15439 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCC4O15439 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCC4O15439 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCC4O15439 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCC4O15439 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCC4O15439 RN7SL219P-201ENST00000582872 296 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.59■□□□□ 0.73
ABCC4O15439 GPR182-203ENST00000622922 591 ntBASIC19.59■□□□□ 0.73
ABCC4O15439 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCC4O15439 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCC4O15439 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCC4O15439 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCC4O15439 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.58■□□□□ 0.73
ABCC4O15439 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.73
ABCC4O15439 RPL13AP25-201ENST00000484130 612 ntBASIC19.58■□□□□ 0.73
ABCC4O15439 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.58■□□□□ 0.73
ABCC4O15439 RNA5SP412-201ENST00000516234 123 ntBASIC19.58■□□□□ 0.73
ABCC4O15439 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.58■□□□□ 0.73
ABCC4O15439 AP000812.2-201ENST00000538934 718 ntBASIC19.58■□□□□ 0.73
ABCC4O15439 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 AC005252.2-201ENST00000624630 1141 ntBASIC19.58■□□□□ 0.73
ABCC4O15439 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.58■□□□□ 0.73
ABCC4O15439 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ABCC4O15439 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.58■□□□□ 0.73
ABCC4O15439 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCC4O15439 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.58■□□□□ 0.72
ABCC4O15439 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCC4O15439 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms