Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 CETN4P-206ENST00000642099 2168 ntBASIC12.5□□□□□ -0.41
UPK2O00526 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UPK2O00526 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UPK2O00526 AJ011931.1-201ENST00000618749 2492 ntBASIC12.49□□□□□ -0.41
UPK2O00526 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 AC074338.1-201ENST00000416825 156 ntBASIC12.49□□□□□ -0.41
UPK2O00526 FAM8A3P-201ENST00000427218 844 ntBASIC12.49□□□□□ -0.41
UPK2O00526 GHSR-202ENST00000427970 912 ntBASIC12.49□□□□□ -0.41
UPK2O00526 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 SERBP1P3-201ENST00000459980 809 ntBASIC12.49□□□□□ -0.41
UPK2O00526 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 AC015910.1-201ENST00000579400 975 ntBASIC12.49□□□□□ -0.41
UPK2O00526 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 AC010327.4-202ENST00000591484 748 ntBASIC12.49□□□□□ -0.41
UPK2O00526 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
UPK2O00526 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UPK2O00526 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
UPK2O00526 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK2O00526 AL390755.1-201ENST00000623716 2027 ntBASIC12.49□□□□□ -0.41
UPK2O00526 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 Z97205.2-201ENST00000564697 1639 ntBASIC12.48□□□□□ -0.41
UPK2O00526 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms