Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK1AO00322 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK1AO00322 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
UPK1AO00322 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UPK1AO00322 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.73□□□□□ -0.05
UPK1AO00322 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 FAM86GP-201ENST00000448322 971 ntBASIC14.73□□□□□ -0.05
UPK1AO00322 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 AL512361.1-201ENST00000554200 418 ntBASIC14.73□□□□□ -0.05
UPK1AO00322 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
UPK1AO00322 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UPK1AO00322 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1AO00322 Z97205.2-201ENST00000564697 1639 ntBASIC14.73□□□□□ -0.05
UPK1AO00322 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1AO00322 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
UPK1AO00322 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.73□□□□□ -0.05
UPK1AO00322 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 AC074338.1-201ENST00000416825 156 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 AL645939.2-201ENST00000427340 991 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 AC092580.3-201ENST00000430932 139 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1AO00322 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 AC027369.6-201ENST00000525520 931 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 AC025048.3-201ENST00000590609 569 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 AC005702.4-201ENST00000618393 416 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.72□□□□□ -0.05
UPK1AO00322 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1AO00322 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
UPK1AO00322 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1AO00322 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms