Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 MIR648-201ENST00000385046 94 ntBASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 DUSP5P2-201ENST00000426873 1033 ntBASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 REEP1-209ENST00000541910 969 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 VPS53-216ENST00000574029 585 ntTSL 4 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 MDK-213ENST00000617138 635 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 Six3os1_6.1-201ENST00000620790 196 ntBASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 HLA-B-256ENST00000639848 1089 ntBASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHKB-CPT1BH3BT56 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 PARN-202ENST00000420015 2360 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 GGT3P-204ENST00000453783 1664 ntBASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC8.57□□□□□ -1.04
CHKB-CPT1BH3BT56 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms