Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 MIR1909-201ENST00000411312 80 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AL442647.2-201ENST00000429864 857 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AC015936.2-201ENST00000593177 259 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AC008735.3-201ENST00000596646 500 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AL512343.1-201ENST00000605837 169 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 CU634019.7-201ENST00000624153 1185 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 FP236241.2-201ENST00000624906 1185 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AC046158.3-201ENST00000624947 2558 ntBASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AL162726.2-201ENST00000438986 1017 ntBASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA2E9PIF3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms