Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.14■■□□□ 1.78
PCDHA2Q9Y5H9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA2Q9Y5H9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA2Q9Y5H9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA2Q9Y5H9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA2Q9Y5H9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 TSPY9P-201ENST00000440215 945 ntBASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 TSPY11P-201ENST00000442607 1045 ntBASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHA2Q9Y5H9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHA2Q9Y5H9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA2Q9Y5H9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDHA2Q9Y5H9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA2Q9Y5H9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 AC135731.1-201ENST00000569415 2548 ntBASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA2Q9Y5H9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHA2Q9Y5H9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
PCDHA2Q9Y5H9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHA2Q9Y5H9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA2Q9Y5H9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHA2Q9Y5H9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
PCDHA2Q9Y5H9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA2Q9Y5H9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 MIR6089-201ENST00000616698 64 ntBASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
PCDHA2Q9Y5H9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA2Q9Y5H9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 AC008406.3-201ENST00000620001 1374 ntBASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA2Q9Y5H9 AF131216.4-201ENST00000638924 1588 ntBASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 AP003733.4-201ENST00000623785 1697 ntBASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 AL139125.2-201ENST00000623134 1869 ntBASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA2Q9Y5H9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 AC010997.5-201ENST00000609182 354 ntBASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA2Q9Y5H9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA2Q9Y5H9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA2Q9Y5H9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHA2Q9Y5H9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHA2Q9Y5H9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA2Q9Y5H9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PCDHA2Q9Y5H9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26■■□□□ 1.75
PCDHA2Q9Y5H9 AC090877.2-201ENST00000558441 1738 ntBASIC26■■□□□ 1.75
PCDHA2Q9Y5H9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA2Q9Y5H9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms