Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00588Q9Y4M8 AC008406.3-201ENST00000620001 1374 ntBASIC15.96■□□□□ 0.15
LINC00588Q9Y4M8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00588Q9Y4M8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00588Q9Y4M8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 MIR6089-201ENST00000616698 64 ntBASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00588Q9Y4M8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00588Q9Y4M8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 AL117332.1-201ENST00000622628 974 ntBASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00588Q9Y4M8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00588Q9Y4M8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 AL356740.2-201ENST00000601559 647 ntBASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 MIR6722-201ENST00000617286 78 ntBASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00588Q9Y4M8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 MIR3621-201ENST00000580529 85 ntBASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00588Q9Y4M8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 AC004448.1-201ENST00000458332 883 ntBASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.89■□□□□ 0.13
LINC00588Q9Y4M8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 AC131281.2-201ENST00000520478 145 ntBASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00588Q9Y4M8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms