Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC1Q9Y3B2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC1Q9Y3B2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC1Q9Y3B2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC1Q9Y3B2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.73■□□□□ 0.91
EXOSC1Q9Y3B2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EXOSC1Q9Y3B2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC1Q9Y3B2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC1Q9Y3B2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC1Q9Y3B2 CLDN5-201ENST00000403084 2357 ntBASIC20.72■□□□□ 0.91
EXOSC1Q9Y3B2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.71■□□□□ 0.91
EXOSC1Q9Y3B2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 AL157400.5-201ENST00000507624 621 ntBASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC1Q9Y3B2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.69■□□□□ 0.9
EXOSC1Q9Y3B2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC1Q9Y3B2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC1Q9Y3B2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXOSC1Q9Y3B2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 CR559946.2-201ENST00000623684 991 ntBASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 FOXO3B-201ENST00000395675 1928 ntBASIC20.65■□□□□ 0.9
EXOSC1Q9Y3B2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.64■□□□□ 0.9
EXOSC1Q9Y3B2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 AC233723.2-201ENST00000623798 2106 ntBASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms