Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.93■□□□□ 0.78
MRPS28Q9Y2Q9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS28Q9Y2Q9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPS28Q9Y2Q9 AC026202.3-201ENST00000600805 1127 ntBASIC19.91■□□□□ 0.78
MRPS28Q9Y2Q9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MRPS28Q9Y2Q9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPS28Q9Y2Q9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MRPS28Q9Y2Q9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MRPS28Q9Y2Q9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.78
MRPS28Q9Y2Q9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.89■□□□□ 0.77
MRPS28Q9Y2Q9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MRPS28Q9Y2Q9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MRPS28Q9Y2Q9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPS28Q9Y2Q9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 GPX1-201ENST00000419349 1106 ntBASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPS28Q9Y2Q9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPS28Q9Y2Q9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MRPS28Q9Y2Q9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPS28Q9Y2Q9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPS28Q9Y2Q9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPS28Q9Y2Q9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPS28Q9Y2Q9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms