Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BSNQ9UPA5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.31■■□□□ 1
BSNQ9UPA5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.3■■□□□ 1
BSNQ9UPA5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.3■■□□□ 1
BSNQ9UPA5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.3■■□□□ 1
BSNQ9UPA5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.3■■□□□ 1
BSNQ9UPA5 IRS3P-201ENST00000223076 1006 ntBASIC21.3■■□□□ 1
BSNQ9UPA5 CA15P2-201ENST00000611168 834 ntBASIC21.3■■□□□ 1
BSNQ9UPA5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.3■■□□□ 1
BSNQ9UPA5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
BSNQ9UPA5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.3■■□□□ 1
BSNQ9UPA5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.3■■□□□ 1
BSNQ9UPA5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.29■■□□□ 1
BSNQ9UPA5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BSNQ9UPA5 AL031602.1-201ENST00000633169 911 ntBASIC21.29■■□□□ 1
BSNQ9UPA5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.29■■□□□ 1
BSNQ9UPA5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BSNQ9UPA5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.29■■□□□ 1
BSNQ9UPA5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BSNQ9UPA5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BSNQ9UPA5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.28■■□□□ 1
BSNQ9UPA5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.28■■□□□ 1
BSNQ9UPA5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.28■■□□□ 1
BSNQ9UPA5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BSNQ9UPA5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BSNQ9UPA5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BSNQ9UPA5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.28■■□□□ 1
BSNQ9UPA5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.27■■□□□ 1
BSNQ9UPA5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
BSNQ9UPA5 AC096887.2-201ENST00000623443 1957 ntBASIC21.27■■□□□ 1
BSNQ9UPA5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
BSNQ9UPA5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BSNQ9UPA5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.27■■□□□ 1
BSNQ9UPA5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.26■□□□□ 0.99
BSNQ9UPA5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BSNQ9UPA5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.26■□□□□ 0.99
BSNQ9UPA5 AC142472.1-201ENST00000612013 1741 ntBASIC21.26■□□□□ 0.99
BSNQ9UPA5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
BSNQ9UPA5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.26■□□□□ 0.99
BSNQ9UPA5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.26■□□□□ 0.99
BSNQ9UPA5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BSNQ9UPA5 SERBP1P1-201ENST00000396021 1160 ntBASIC21.25■□□□□ 0.99
BSNQ9UPA5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.25■□□□□ 0.99
BSNQ9UPA5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
BSNQ9UPA5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BSNQ9UPA5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.25■□□□□ 0.99
BSNQ9UPA5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.25■□□□□ 0.99
BSNQ9UPA5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
BSNQ9UPA5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BSNQ9UPA5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 ID1-201ENST00000376105 1233 ntBASIC21.24■□□□□ 0.99
BSNQ9UPA5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
BSNQ9UPA5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
BSNQ9UPA5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BSNQ9UPA5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.23■□□□□ 0.99
BSNQ9UPA5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BSNQ9UPA5 YBX1P1-201ENST00000445822 960 ntBASIC21.23■□□□□ 0.99
BSNQ9UPA5 DUX4L19-201ENST00000557448 1267 ntBASIC21.23■□□□□ 0.99
BSNQ9UPA5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
BSNQ9UPA5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BSNQ9UPA5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.23■□□□□ 0.99
BSNQ9UPA5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BSNQ9UPA5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.22■□□□□ 0.99
BSNQ9UPA5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BSNQ9UPA5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
BSNQ9UPA5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BSNQ9UPA5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
BSNQ9UPA5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.22■□□□□ 0.99
BSNQ9UPA5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BSNQ9UPA5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BSNQ9UPA5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.21■□□□□ 0.99
BSNQ9UPA5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.21■□□□□ 0.99
BSNQ9UPA5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
BSNQ9UPA5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BSNQ9UPA5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BSNQ9UPA5 AC090877.2-201ENST00000558441 1738 ntBASIC21.21■□□□□ 0.99
BSNQ9UPA5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BSNQ9UPA5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BSNQ9UPA5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
BSNQ9UPA5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BSNQ9UPA5 SLC47A1P1-202ENST00000449666 945 ntBASIC21.2■□□□□ 0.98
BSNQ9UPA5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.2■□□□□ 0.98
BSNQ9UPA5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BSNQ9UPA5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
BSNQ9UPA5 KRT18P5-201ENST00000436075 1291 ntBASIC21.19■□□□□ 0.98
BSNQ9UPA5 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.19■□□□□ 0.98
BSNQ9UPA5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.19■□□□□ 0.98
BSNQ9UPA5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BSNQ9UPA5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.19■□□□□ 0.98
BSNQ9UPA5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BSNQ9UPA5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.19■□□□□ 0.98
BSNQ9UPA5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms