Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HCFC1R1Q9NWW0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.36■■□□□ 1.49
HCFC1R1Q9NWW0 AC092803.2-201ENST00000564287 1899 ntBASIC24.36■■□□□ 1.49
HCFC1R1Q9NWW0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HCFC1R1Q9NWW0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
HCFC1R1Q9NWW0 AL121749.1-202ENST00000609313 2153 ntBASIC24.36■■□□□ 1.49
HCFC1R1Q9NWW0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 UNC93B3-201ENST00000308076 687 ntBASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCFC1R1Q9NWW0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.34■■□□□ 1.49
HCFC1R1Q9NWW0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC1R1Q9NWW0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 AC004448.1-201ENST00000458332 883 ntBASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HCFC1R1Q9NWW0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
HCFC1R1Q9NWW0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HCFC1R1Q9NWW0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
HCFC1R1Q9NWW0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HCFC1R1Q9NWW0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HCFC1R1Q9NWW0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.32■■□□□ 1.48
HCFC1R1Q9NWW0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 ZNRF2P3-201ENST00000424200 374 ntBASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 AL136162.1-201ENST00000607711 1078 ntBASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCFC1R1Q9NWW0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
HCFC1R1Q9NWW0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 SRD5A1P1-201ENST00000442297 786 ntBASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 AC142381.2-201ENST00000566120 298 ntBASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HCFC1R1Q9NWW0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 AL031432.3-201ENST00000607698 485 ntBASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HCFC1R1Q9NWW0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HCFC1R1Q9NWW0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 AC135279.3-201ENST00000610945 1311 ntBASIC24.26■■□□□ 1.47
HCFC1R1Q9NWW0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 AC024257.2-201ENST00000549699 147 ntBASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.25■■□□□ 1.47
HCFC1R1Q9NWW0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 SUDS3P1-201ENST00000505831 966 ntBASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.24■■□□□ 1.47
HCFC1R1Q9NWW0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.23■■□□□ 1.47
HCFC1R1Q9NWW0 SLC6A10P-202ENST00000431994 2058 ntBASIC24.23■■□□□ 1.47
HCFC1R1Q9NWW0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
HCFC1R1Q9NWW0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms