Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Q9N2K0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9N2K0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9N2K0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 AC009831.1-201ENST00000580420 1582 ntBASIC19.4■□□□□ 0.7
Q9N2K0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.4■□□□□ 0.7
Q9N2K0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
Q9N2K0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9N2K0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Q9N2K0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.39■□□□□ 0.7
Q9N2K0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Q9N2K0 AC133552.2-201ENST00000619106 1032 ntBASIC19.39■□□□□ 0.69
Q9N2K0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9N2K0 AC068473.5-201ENST00000616428 2072 ntBASIC19.39■□□□□ 0.69
Q9N2K0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9N2K0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9N2K0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9N2K0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Q9N2K0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.38■□□□□ 0.69
Q9N2K0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Q9N2K0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.38■□□□□ 0.69
Q9N2K0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.38■□□□□ 0.69
Q9N2K0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9N2K0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Q9N2K0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Q9N2K0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.37■□□□□ 0.69
Q9N2K0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Q9N2K0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Q9N2K0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Q9N2K0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.37■□□□□ 0.69
Q9N2K0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9N2K0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.36■□□□□ 0.69
Q9N2K0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Q9N2K0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Q9N2K0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9N2K0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q9N2K0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9N2K0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.35■□□□□ 0.69
Q9N2K0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9N2K0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Q9N2K0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Q9N2K0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9N2K0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9N2K0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
Q9N2K0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Q9N2K0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9N2K0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9N2K0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Q9N2K0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9N2K0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Q9N2K0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9N2K0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9N2K0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9N2K0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Q9N2K0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.33■□□□□ 0.68
Q9N2K0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9N2K0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.33■□□□□ 0.68
Q9N2K0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Q9N2K0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.32■□□□□ 0.68
Q9N2K0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9N2K0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Q9N2K0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9N2K0 RPS2P7-201ENST00000447334 885 ntBASIC19.32■□□□□ 0.68
Q9N2K0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms