Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG1Q9H6L5 AC239859.2-201ENST00000444165 318 ntBASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 HLA-L-211ENST00000482052 1765 ntBASIC23.78■■□□□ 1.4
RETREG1Q9H6L5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG1Q9H6L5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG1Q9H6L5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG1Q9H6L5 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.77■■□□□ 1.4
RETREG1Q9H6L5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 MIR4787-201ENST00000607364 84 ntBASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG1Q9H6L5 AC141586.4-201ENST00000624558 1573 ntBASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 AC092028.1-203ENST00000608262 953 ntBASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG1Q9H6L5 AL022069.1-201ENST00000568025 1636 ntBASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.74■■□□□ 1.39
RETREG1Q9H6L5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 AC004448.1-201ENST00000458332 883 ntBASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RETREG1Q9H6L5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG1Q9H6L5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG1Q9H6L5 GUSBP5-201ENST00000418136 578 ntBASIC23.7■■□□□ 1.38
RETREG1Q9H6L5 SNX5-217ENST00000606557 1087 ntBASIC23.7■■□□□ 1.38
RETREG1Q9H6L5 MIR6722-201ENST00000617286 78 ntBASIC23.7■■□□□ 1.38
RETREG1Q9H6L5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG1Q9H6L5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.7■■□□□ 1.38
RETREG1Q9H6L5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 AC131274.2-201ENST00000580697 1507 ntBASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG1Q9H6L5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.68■■□□□ 1.38
RETREG1Q9H6L5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms