Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.79■■□□□ 1.56
SNX25Q9H3E2 AC142381.3-201ENST00000568208 1670 ntBASIC24.78■■□□□ 1.56
SNX25Q9H3E2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNX25Q9H3E2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.78■■□□□ 1.56
SNX25Q9H3E2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.78■■□□□ 1.56
SNX25Q9H3E2 AC092028.1-203ENST00000608262 953 ntBASIC24.78■■□□□ 1.56
SNX25Q9H3E2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.78■■□□□ 1.56
SNX25Q9H3E2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNX25Q9H3E2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 AP003733.4-201ENST00000623785 1697 ntBASIC24.76■■□□□ 1.55
SNX25Q9H3E2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 TSPY9P-201ENST00000440215 945 ntBASIC24.76■■□□□ 1.55
SNX25Q9H3E2 TSPY11P-201ENST00000442607 1045 ntBASIC24.76■■□□□ 1.55
SNX25Q9H3E2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNX25Q9H3E2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNX25Q9H3E2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SNX25Q9H3E2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNX25Q9H3E2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
SNX25Q9H3E2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.74■■□□□ 1.55
SNX25Q9H3E2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNX25Q9H3E2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SNX25Q9H3E2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SNX25Q9H3E2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.73■■□□□ 1.55
SNX25Q9H3E2 AC138932.3-201ENST00000567634 1902 ntBASIC24.73■■□□□ 1.55
SNX25Q9H3E2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SNX25Q9H3E2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SNX25Q9H3E2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
SNX25Q9H3E2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 UNC93B8-201ENST00000511903 705 ntBASIC24.71■■□□□ 1.55
SNX25Q9H3E2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.71■■□□□ 1.55
SNX25Q9H3E2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.7■■□□□ 1.55
SNX25Q9H3E2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.7■■□□□ 1.54
SNX25Q9H3E2 HLA-L-211ENST00000482052 1765 ntBASIC24.7■■□□□ 1.54
SNX25Q9H3E2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SNX25Q9H3E2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms