Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.3■■□□□ 1.32
CLPBQ9H078 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.3■■□□□ 1.32
CLPBQ9H078 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLPBQ9H078 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLPBQ9H078 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLPBQ9H078 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLPBQ9H078 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
CLPBQ9H078 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLPBQ9H078 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLPBQ9H078 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.29■■□□□ 1.32
CLPBQ9H078 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CLPBQ9H078 AC137630.3-201ENST00000607245 391 ntBASIC23.29■■□□□ 1.32
CLPBQ9H078 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLPBQ9H078 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLPBQ9H078 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPBQ9H078 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPBQ9H078 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CLPBQ9H078 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.28■■□□□ 1.32
CLPBQ9H078 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPBQ9H078 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPBQ9H078 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLPBQ9H078 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPBQ9H078 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPBQ9H078 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPBQ9H078 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPBQ9H078 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CLPBQ9H078 MIR6089-201ENST00000616698 64 ntBASIC23.27■■□□□ 1.32
CLPBQ9H078 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.27■■□□□ 1.32
CLPBQ9H078 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.26■■□□□ 1.31
CLPBQ9H078 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.26■■□□□ 1.31
CLPBQ9H078 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPBQ9H078 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPBQ9H078 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.26■■□□□ 1.31
CLPBQ9H078 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPBQ9H078 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.26■■□□□ 1.31
CLPBQ9H078 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.26■■□□□ 1.31
CLPBQ9H078 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CLPBQ9H078 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CLPBQ9H078 UNC93B8-201ENST00000511903 705 ntBASIC23.25■■□□□ 1.31
CLPBQ9H078 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.25■■□□□ 1.31
CLPBQ9H078 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPBQ9H078 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.25■■□□□ 1.31
CLPBQ9H078 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.25■■□□□ 1.31
CLPBQ9H078 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLPBQ9H078 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLPBQ9H078 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPBQ9H078 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPBQ9H078 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPBQ9H078 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.25■■□□□ 1.31
CLPBQ9H078 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLPBQ9H078 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLPBQ9H078 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.24■■□□□ 1.31
CLPBQ9H078 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLPBQ9H078 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.24■■□□□ 1.31
CLPBQ9H078 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CLPBQ9H078 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPBQ9H078 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPBQ9H078 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.23■■□□□ 1.31
CLPBQ9H078 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.23■■□□□ 1.31
CLPBQ9H078 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CLPBQ9H078 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPBQ9H078 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.23■■□□□ 1.31
CLPBQ9H078 MIR4281-201ENST00000580852 62 ntBASIC23.23■■□□□ 1.31
CLPBQ9H078 AC021242.3-201ENST00000607598 1377 ntBASIC23.23■■□□□ 1.31
CLPBQ9H078 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CLPBQ9H078 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CLPBQ9H078 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.22■■□□□ 1.31
CLPBQ9H078 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.22■■□□□ 1.31
CLPBQ9H078 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.22■■□□□ 1.31
CLPBQ9H078 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLPBQ9H078 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLPBQ9H078 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLPBQ9H078 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLPBQ9H078 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.2■■□□□ 1.3
CLPBQ9H078 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.2■■□□□ 1.3
CLPBQ9H078 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLPBQ9H078 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.19■■□□□ 1.3
CLPBQ9H078 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.19■■□□□ 1.3
CLPBQ9H078 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLPBQ9H078 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPBQ9H078 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLPBQ9H078 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLPBQ9H078 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms