Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CMKLR1Q99788 PBX2P1-201ENST00000493219 1291 ntBASIC22.25■■□□□ 1.15
CMKLR1Q99788 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.25■■□□□ 1.15
CMKLR1Q99788 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.25■■□□□ 1.15
CMKLR1Q99788 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CMKLR1Q99788 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.24■■□□□ 1.15
CMKLR1Q99788 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CMKLR1Q99788 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CMKLR1Q99788 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CMKLR1Q99788 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CMKLR1Q99788 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.24■■□□□ 1.15
CMKLR1Q99788 AC106739.1-201ENST00000617035 715 ntBASIC22.24■■□□□ 1.15
CMKLR1Q99788 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
CMKLR1Q99788 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CMKLR1Q99788 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CMKLR1Q99788 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CMKLR1Q99788 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CMKLR1Q99788 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CMKLR1Q99788 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.23■■□□□ 1.15
CMKLR1Q99788 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CMKLR1Q99788 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.23■■□□□ 1.15
CMKLR1Q99788 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.22■■□□□ 1.15
CMKLR1Q99788 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.22■■□□□ 1.15
CMKLR1Q99788 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CMKLR1Q99788 SRD5A1P1-201ENST00000442297 786 ntBASIC22.22■■□□□ 1.15
CMKLR1Q99788 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CMKLR1Q99788 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CMKLR1Q99788 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CMKLR1Q99788 AC010501.1-201ENST00000606270 1962 ntBASIC22.21■■□□□ 1.15
CMKLR1Q99788 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CMKLR1Q99788 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CMKLR1Q99788 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CMKLR1Q99788 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.2■■□□□ 1.14
CMKLR1Q99788 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CMKLR1Q99788 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.19■■□□□ 1.14
CMKLR1Q99788 AC142381.2-201ENST00000566120 298 ntBASIC22.19■■□□□ 1.14
CMKLR1Q99788 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.19■■□□□ 1.14
CMKLR1Q99788 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.19■■□□□ 1.14
CMKLR1Q99788 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CMKLR1Q99788 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CMKLR1Q99788 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.19■■□□□ 1.14
CMKLR1Q99788 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CMKLR1Q99788 UNC93B3-201ENST00000308076 687 ntBASIC22.18■■□□□ 1.14
CMKLR1Q99788 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CMKLR1Q99788 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.18■■□□□ 1.14
CMKLR1Q99788 AC004448.1-201ENST00000458332 883 ntBASIC22.18■■□□□ 1.14
CMKLR1Q99788 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.18■■□□□ 1.14
CMKLR1Q99788 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CMKLR1Q99788 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CMKLR1Q99788 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CMKLR1Q99788 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.17■■□□□ 1.14
CMKLR1Q99788 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CMKLR1Q99788 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CMKLR1Q99788 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.16■■□□□ 1.14
CMKLR1Q99788 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CMKLR1Q99788 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CMKLR1Q99788 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CMKLR1Q99788 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CMKLR1Q99788 AL136162.1-201ENST00000607711 1078 ntBASIC22.16■■□□□ 1.14
CMKLR1Q99788 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CMKLR1Q99788 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CMKLR1Q99788 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CMKLR1Q99788 AC135279.3-201ENST00000610945 1311 ntBASIC22.15■■□□□ 1.14
CMKLR1Q99788 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CMKLR1Q99788 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.15■■□□□ 1.14
CMKLR1Q99788 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CMKLR1Q99788 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CMKLR1Q99788 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CMKLR1Q99788 AC005703.6-201ENST00000623265 1329 ntBASIC22.14■■□□□ 1.14
CMKLR1Q99788 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.14■■□□□ 1.13
CMKLR1Q99788 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CMKLR1Q99788 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CMKLR1Q99788 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.14■■□□□ 1.13
CMKLR1Q99788 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CMKLR1Q99788 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CMKLR1Q99788 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.13■■□□□ 1.13
CMKLR1Q99788 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.13■■□□□ 1.13
CMKLR1Q99788 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CMKLR1Q99788 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CMKLR1Q99788 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms