Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.99■□□□□ 0.47
DUX3Q96PT4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
DUX3Q96PT4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUX3Q96PT4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.99■□□□□ 0.47
DUX3Q96PT4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.99■□□□□ 0.47
DUX3Q96PT4 AC008406.3-201ENST00000620001 1374 ntBASIC17.99■□□□□ 0.47
DUX3Q96PT4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUX3Q96PT4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUX3Q96PT4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DUX3Q96PT4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DUX3Q96PT4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.98■□□□□ 0.47
DUX3Q96PT4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DUX3Q96PT4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DUX3Q96PT4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.98■□□□□ 0.47
DUX3Q96PT4 AC145676.1-201ENST00000514988 2004 ntBASIC17.98■□□□□ 0.47
DUX3Q96PT4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX3Q96PT4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
DUX3Q96PT4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX3Q96PT4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX3Q96PT4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.97■□□□□ 0.47
DUX3Q96PT4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.97■□□□□ 0.47
DUX3Q96PT4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX3Q96PT4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX3Q96PT4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX3Q96PT4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
DUX3Q96PT4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 SLC6A10P-202ENST00000431994 2058 ntBASIC17.96■□□□□ 0.47
DUX3Q96PT4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX3Q96PT4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
DUX3Q96PT4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX3Q96PT4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
DUX3Q96PT4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX3Q96PT4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.95■□□□□ 0.46
DUX3Q96PT4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
DUX3Q96PT4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.95■□□□□ 0.46
DUX3Q96PT4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX3Q96PT4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX3Q96PT4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.95■□□□□ 0.46
DUX3Q96PT4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DUX3Q96PT4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX3Q96PT4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX3Q96PT4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX3Q96PT4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX3Q96PT4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX3Q96PT4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DUX3Q96PT4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX3Q96PT4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.93■□□□□ 0.46
DUX3Q96PT4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.93■□□□□ 0.46
DUX3Q96PT4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.93■□□□□ 0.46
DUX3Q96PT4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.93■□□□□ 0.46
DUX3Q96PT4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DUX3Q96PT4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DUX3Q96PT4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DUX3Q96PT4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.92■□□□□ 0.46
DUX3Q96PT4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.91■□□□□ 0.46
DUX3Q96PT4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
DUX3Q96PT4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.91■□□□□ 0.46
DUX3Q96PT4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
DUX3Q96PT4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DUX3Q96PT4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DUX3Q96PT4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DUX3Q96PT4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.91■□□□□ 0.46
DUX3Q96PT4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DUX3Q96PT4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 MIR6724-1-201ENST00000616420 92 ntBASIC17.9■□□□□ 0.46
DUX3Q96PT4 MIR6724-2-201ENST00000616483 92 ntBASIC17.9■□□□□ 0.46
DUX3Q96PT4 MIR6724-4-201ENST00000617390 92 ntBASIC17.9■□□□□ 0.46
DUX3Q96PT4 MIR6724-3-201ENST00000622482 92 ntBASIC17.9■□□□□ 0.46
DUX3Q96PT4 AL117332.1-201ENST00000622628 974 ntBASIC17.9■□□□□ 0.46
DUX3Q96PT4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.9■□□□□ 0.46
DUX3Q96PT4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
DUX3Q96PT4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DUX3Q96PT4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DUX3Q96PT4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms