Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 AC027682.1-201ENST00000562846 899 ntBASIC27.61■■■□□ 2.01
CDCA5Q96FF9 AC092171.4-201ENST00000609130 632 ntBASIC27.61■■■□□ 2.01
CDCA5Q96FF9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.6■■■□□ 2.01
CDCA5Q96FF9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 IRS3P-201ENST00000223076 1006 ntBASIC27.59■■■□□ 2.01
CDCA5Q96FF9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDCA5Q96FF9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
CDCA5Q96FF9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CDCA5Q96FF9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDCA5Q96FF9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDCA5Q96FF9 AC008764.7-201ENST00000593779 1081 ntBASIC27.57■■■□□ 2
CDCA5Q96FF9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDCA5Q96FF9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDCA5Q96FF9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.56■■■□□ 2
CDCA5Q96FF9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDCA5Q96FF9 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.56■■■□□ 2
CDCA5Q96FF9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.56■■■□□ 2
CDCA5Q96FF9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CDCA5Q96FF9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CDCA5Q96FF9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
CDCA5Q96FF9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.55■■■□□ 2
CDCA5Q96FF9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.55■■■□□ 2
CDCA5Q96FF9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.55■■■□□ 2
CDCA5Q96FF9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.55■■■□□ 2
CDCA5Q96FF9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CDCA5Q96FF9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.54■■■□□ 2
CDCA5Q96FF9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.54■■■□□ 2
CDCA5Q96FF9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDCA5Q96FF9 AC099791.2-201ENST00000605725 427 ntBASIC27.54■■■□□ 2
CDCA5Q96FF9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.54■■■□□ 2
CDCA5Q96FF9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDCA5Q96FF9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CDCA5Q96FF9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
CDCA5Q96FF9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CDCA5Q96FF9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.53■■■□□ 2
CDCA5Q96FF9 AC090192.1-201ENST00000517740 490 ntBASIC27.53■■■□□ 2
CDCA5Q96FF9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.53■■■□□ 2
CDCA5Q96FF9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.52■■■□□ 2
CDCA5Q96FF9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CDCA5Q96FF9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.52■■■□□ 2
CDCA5Q96FF9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CDCA5Q96FF9 AC099791.1-201ENST00000416440 715 ntBASIC27.52■■■□□ 2
CDCA5Q96FF9 AC011298.3-201ENST00000615796 283 ntBASIC27.52■■■□□ 2
CDCA5Q96FF9 RARRES2P11-201ENST00000635158 484 ntBASIC27.52■■■□□ 2
CDCA5Q96FF9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.52■■■□□ 2
CDCA5Q96FF9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CDCA5Q96FF9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDCA5Q96FF9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
CDCA5Q96FF9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CDCA5Q96FF9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CDCA5Q96FF9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.48■■□□□ 1.99
CDCA5Q96FF9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms