Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APH1AQ96BI3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APH1AQ96BI3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APH1AQ96BI3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.57■□□□□ 0.88
APH1AQ96BI3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APH1AQ96BI3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.57■□□□□ 0.88
APH1AQ96BI3 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.57■□□□□ 0.88
APH1AQ96BI3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.57■□□□□ 0.88
APH1AQ96BI3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
APH1AQ96BI3 AP003733.4-201ENST00000623785 1697 ntBASIC20.57■□□□□ 0.88
APH1AQ96BI3 AC021242.3-201ENST00000607598 1377 ntBASIC20.57■□□□□ 0.88
APH1AQ96BI3 AF131216.4-201ENST00000638924 1588 ntBASIC20.56■□□□□ 0.88
APH1AQ96BI3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APH1AQ96BI3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APH1AQ96BI3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APH1AQ96BI3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.56■□□□□ 0.88
APH1AQ96BI3 MIR4787-201ENST00000607364 84 ntBASIC20.56■□□□□ 0.88
APH1AQ96BI3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
APH1AQ96BI3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
APH1AQ96BI3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APH1AQ96BI3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APH1AQ96BI3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APH1AQ96BI3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APH1AQ96BI3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
APH1AQ96BI3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.54■□□□□ 0.88
APH1AQ96BI3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APH1AQ96BI3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
APH1AQ96BI3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APH1AQ96BI3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APH1AQ96BI3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.53■□□□□ 0.88
APH1AQ96BI3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APH1AQ96BI3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
APH1AQ96BI3 AC138932.3-201ENST00000567634 1902 ntBASIC20.53■□□□□ 0.88
APH1AQ96BI3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.52■□□□□ 0.88
APH1AQ96BI3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APH1AQ96BI3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APH1AQ96BI3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APH1AQ96BI3 GUSBP5-201ENST00000418136 578 ntBASIC20.52■□□□□ 0.88
APH1AQ96BI3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.52■□□□□ 0.88
APH1AQ96BI3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.52■□□□□ 0.88
APH1AQ96BI3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APH1AQ96BI3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.52■□□□□ 0.88
APH1AQ96BI3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.52■□□□□ 0.88
APH1AQ96BI3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.51■□□□□ 0.87
APH1AQ96BI3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
APH1AQ96BI3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APH1AQ96BI3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.51■□□□□ 0.87
APH1AQ96BI3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.5■□□□□ 0.87
APH1AQ96BI3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.5■□□□□ 0.87
APH1AQ96BI3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.5■□□□□ 0.87
APH1AQ96BI3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APH1AQ96BI3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APH1AQ96BI3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APH1AQ96BI3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APH1AQ96BI3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 AC092028.1-203ENST00000608262 953 ntBASIC20.49■□□□□ 0.87
APH1AQ96BI3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
APH1AQ96BI3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
APH1AQ96BI3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.48■□□□□ 0.87
APH1AQ96BI3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
APH1AQ96BI3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.48■□□□□ 0.87
APH1AQ96BI3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
APH1AQ96BI3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APH1AQ96BI3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.47■□□□□ 0.87
APH1AQ96BI3 HLA-L-211ENST00000482052 1765 ntBASIC20.47■□□□□ 0.87
APH1AQ96BI3 AC135731.1-201ENST00000569415 2548 ntBASIC20.47■□□□□ 0.87
APH1AQ96BI3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APH1AQ96BI3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms