Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AC087623.3-201ENST00000607047 1098 ntBASIC28.85■■■□□ 2.21
CNKSR1Q969H4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CNKSR1Q969H4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
CNKSR1Q969H4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CNKSR1Q969H4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CNKSR1Q969H4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
CNKSR1Q969H4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CNKSR1Q969H4 CA15P2-201ENST00000611168 834 ntBASIC28.84■■■□□ 2.21
CNKSR1Q969H4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.84■■■□□ 2.21
CNKSR1Q969H4 RASA4CP-201ENST00000424092 1398 ntBASIC28.84■■■□□ 2.21
CNKSR1Q969H4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 AL162430.1-201ENST00000480705 870 ntBASIC28.83■■■□□ 2.21
CNKSR1Q969H4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CNKSR1Q969H4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CNKSR1Q969H4 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.81■■■□□ 2.2
CNKSR1Q969H4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CNKSR1Q969H4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CNKSR1Q969H4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.8■■■□□ 2.2
CNKSR1Q969H4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CNKSR1Q969H4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.8■■■□□ 2.2
CNKSR1Q969H4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CNKSR1Q969H4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.79■■■□□ 2.2
CNKSR1Q969H4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CNKSR1Q969H4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.78■■■□□ 2.2
CNKSR1Q969H4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 SERBP1P1-201ENST00000396021 1160 ntBASIC28.77■■■□□ 2.2
CNKSR1Q969H4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CNKSR1Q969H4 AC027682.1-201ENST00000562846 899 ntBASIC28.77■■■□□ 2.2
CNKSR1Q969H4 AC097639.1-201ENST00000565519 1891 ntBASIC28.76■■■□□ 2.2
CNKSR1Q969H4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CNKSR1Q969H4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
CNKSR1Q969H4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CNKSR1Q969H4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CNKSR1Q969H4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CNKSR1Q969H4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.74■■■□□ 2.19
CNKSR1Q969H4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CNKSR1Q969H4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.74■■■□□ 2.19
CNKSR1Q969H4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CNKSR1Q969H4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
CNKSR1Q969H4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 IRS3P-201ENST00000223076 1006 ntBASIC28.72■■■□□ 2.19
CNKSR1Q969H4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 AL138724.1-201ENST00000606771 1088 ntBASIC28.72■■■□□ 2.19
CNKSR1Q969H4 AC011298.3-201ENST00000615796 283 ntBASIC28.72■■■□□ 2.19
CNKSR1Q969H4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.72■■■□□ 2.19
CNKSR1Q969H4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CNKSR1Q969H4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.71■■■□□ 2.19
CNKSR1Q969H4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CNKSR1Q969H4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CNKSR1Q969H4 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.7■■■□□ 2.18
CNKSR1Q969H4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.7■■■□□ 2.18
CNKSR1Q969H4 AC099791.2-201ENST00000605725 427 ntBASIC28.7■■■□□ 2.18
CNKSR1Q969H4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.7■■■□□ 2.18
CNKSR1Q969H4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.7■■■□□ 2.18
CNKSR1Q969H4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms